Sequence Similarity Clusters for the Entities in PDB 1DWU

Entity #1 | Chains: A,B
RIBOSOMAL PROTEIN L1 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41897
95 % 1 1 35207 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 33649
70 % 4 5 10296
50 % 4 7 7223
40 % 4 13 4092
30 % 26 210 218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4REO 1 A 50S ribosomal protein L1 274
2 4F9T 1 A 50S ribosomal protein L1 274
3 4LQ4 1 A 50S ribosomal protein L1 2190
4 4QVI 1 A 50S ribosomal protein L1 274
5 3UMY 1 A 50S ribosomal protein L1 274
6 3TG8 1 A 50S ribosomal protein L1 274
7 1AD2 1 A RIBOSOMAL PROTEIN L1 274
8 3U4M 1 A 50S ribosomal protein L1 274
9 1I2A 1 A 50S RIBOSOMAL PROTEIN L1P 2190
10 4QG3 1 A 50S ribosomal protein L1 274
11 3U56 1 A 50S ribosomal protein L1 274
12 3QOY 1 A 50S ribosomal protein L1 63363
13 2HW8 2 A 50S ribosomal protein L1 274
14 2OV7 1 A, B, C 50S ribosomal protein L1 274
15 1CJS 1 A 50S RIBOSOMAL PROTEIN L1P 2190
16 2VPL 1 A, C 50S RIBOSOMAL PROTEIN L1 FIRST DOMAIN, RESIDUES 2-68,160-229 274
17 2OUM 1 A 50S ribosomal protein L1 274
18 5J8B 3 C 50S ribosomal protein L1 274
19 1ZHO 2 A, C, E, G 50S ribosomal protein L1 274
20 5NPM 1 A 50S ribosomal protein L1 274
21 4WOI 56 B5 50S ribosomal protein L1 274
22 1MZP 2 A 50s ribosomal protein L1P 2285
23 4QGB 1 A, B 50S ribosomal protein L1 274
24 4WQF 3 AC, CC 50S ribosomal protein L1 274
25 4WPO 3 AC, CC 50S ribosomal protein L1 274
26 1DWU 1 A, B RIBOSOMAL PROTEIN L1 2186
27 4WQU 3 AC, CC 50S ribosomal protein L1 274
28 5E81 28 71, 79 50S ribosomal protein L1 274
29 4U27 53 B5 50S ribosomal protein L1 274
30 5IBB 28 71, 79 50S ribosomal protein L1 274
31 4WQY 3 AC, CC 50S ribosomal protein L1 274
32 5IB7 28 71 50S ribosomal protein L1 274
33 4U26 53 B5 50S ribosomal protein L1 274
34 4V9H 51 BC 50S ribosomal protein L1 274
35 4V90 37 BC RIBOSOMAL PROTEIN L1 274
36 5IB8 28 71 50S ribosomal protein L1 274
37 5EL6 28 71, 79 50S ribosomal protein L1 274
38 5EL7 28 71, 79 50S ribosomal protein L1 274
39 4U24 53 B5 50S ribosomal protein L1 274
40 4WU1 26 71, 79 50S ribosomal protein L1 274
41 5EL4 28 71 50S ribosomal protein L1 274
42 5HAU 3 1C, 2C 50S ribosomal protein L1 274
43 4WF1 53 B5 50S ribosomal protein L1 274
44 4U25 53 B5 50S ribosomal protein L1 274
45 5E7K 28 71, 79 50S ribosomal protein L1 274
46 5EL5 28 71 50S ribosomal protein L1 274
47 4WZO 28 71 50S ribosomal protein L1 274
48 4U20 53 B5 50S ribosomal protein L1 274
49 4U1V 53 B5 50S ribosomal protein L1 274
50 5DM6 1 0 50S ribosomal protein L1 1299
51 4V5J 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
52 4WZD 26 71, 79 50S ribosomal protein L1 274
53 4V8Q 13 AC 50S RIBOSOMAL PROTEIN L1 274
54 4V5L 38 BC 50S RIBOSOMAL PROTEIN L1 274
55 4U1U 53 B5 50S ribosomal protein L1 274
56 6C5L 37 BC, DC 50S ribosomal protein L1 274
57 4V51 36 BC, DC 50S RIBOSOMAL PROTEIN L1 274
58 4V7L 29 BC, DC 50S ribosomal protein L1 274
59 4V5R 38 BC, DC 50S RIBOSOMAL PROTEIN L1 300852
60 4V5K 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
61 4V5Q 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
62 4V7J 26 AC, BC 50S ribosomal protein L1 274
63 4V5C 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
64 4V5E 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
65 4V5P 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
66 4V5D 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
67 4V8X 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
68 4V5S 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
69 4V8N 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
70 4V97 27 BC, DC 50S RIBOSOMAL PROTEIN L1 274
71 4V7M 29 BC, DC 50S ribosomal protein L1 274
72 4V6A 27 BC, DC 50S ribosomal protein L1 274
73 4V7K 26 AC, BC 50S ribosomal protein L1 274
74 4V8U 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
75 4V5F 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
76 5DM7 1 0 50S ribosomal protein L1 1299
77 4V9K 25 BC, DC 50S ribosomal protein L1 274
78 4V5A 37 BC, DC 50S RIBOSOMAL PROTEIN L1 274
79 1U63 2 A, C 50S ribosomal protein L1P 2190
80 4V8J 27 BC, DC 50S ribosomal protein L1 274
81 4V9L 25 BC, DC 50S ribosomal protein L1 274
82 4V5G 38 BC, DC 50S RIBOSOMAL PROTEIN L1 274
83 4V9J 25 BC, DC 50S ribosomal protein L1 274
84 4V8O 37 BC 50S RIBOSOMAL PROTEIN L1 274
85 4V7R 32 BA, DA 60S ribosomal protein L1 4932
86 4V9M 24 BC, DC 50S ribosomal protein L1 274
87 4W29 25 BC, DC 50S ribosomal protein L1 274
88 4V4Y 26 BC 50S ribosomal protein L1 274
89 4V4J 3 A 50S ribosomal protein L1 274
90 4V4X 26 BC 50S ribosomal protein L1 274
91 4V4Z 27 BC 50S RIBOSOMAL PROTEIN L1 274
92 4V4I 3 A 50S ribosomal protein L1 274
93 4V4P 3 AC 50S ribosomal protein L1 274
94 4V49 55 B5 50S ribosomal protein L1P 562
95 4V4A 53 B5 50S ribosomal protein L1P 562
96 4V4G 53 B7, D7, F7, H7, J7 50S ribosomal protein L1P 562
97 6D9J 48 K uL1 9986
98 6D90 48 K uL1 9986
99 6BU8 52 03 50S ribosomal protein L1 562
100 6ENU 55 7 50S ribosomal protein L1 562
101 6ENJ 55 7 50S ribosomal protein L1 562
102 6EK0 46 Lz 60S ribosomal protein L10a 9606
103 5OT7 39 f 50S ribosomal protein L1 274
104 5UYK 52 03 50S ribosomal protein L1 562
105 5UYL 52 03 50S ribosomal protein L1 562
106 5UYM 52 03 50S ribosomal protein L1 562
107 5UYN 52 03 50S ribosomal protein L1 562
108 5UYP 52 03 50S ribosomal protein L1 562
109 5UYQ 52 03 50S ribosomal protein L1 562
110 5UQ7 54 C 50S ribosomal protein L1 274
111 5UQ8 54 C 50S ribosomal protein L1 274
112 5U9F 6 03 50S ribosomal protein L1 562
113 5U9G 6 03 50S ribosomal protein L1 562
114 5T2C 41 l 60S ribosomal protein L10a 9606
115 5LKS 46 Lz 60S ribosomal protein L10a 9606
116 5JUO 5 E uL1 (yeast L1) 4932
117 5JUP 5 E uL1 (yeast L1) 4932
118 5JUS 5 E uL1 (yeast L1) 4932
119 5JUT 5 E uL1 (yeast L1) 4932
120 5JUU 5 E uL1 (yeast L1) 4932
121 5JCS 17 I 60S ribosomal protein L1-A 4932
122 5IT7 45 qq Ribosomal protein 28985
123 5IMQ 29 Z 50S ribosomal protein L1 274
124 5IMR 25 Z 50S ribosomal protein L1 274
125 3JCD 26 5 50S ribosomal protein L1 562
126 3JCE 27 5 50S ribosomal protein L1 562
127 5FL8 9 I 60S ribosomal protein L1-B 4932
128 5ADY 6 5 50S RIBOSOMAL PROTEIN L1 562
129 5A9Z 3 AC 50S ribosomal protein L1 274
130 5AA0 3 AC 50S ribosomal protein L1 274
131 3JA1 37 LC 50S ribosomal protein L1 562
132 3J9Z 27 LC 50S ribosomal protein L1 562
133 4UG0 46 Lz 60S RIBOSOMAL PROTEIN L10A 9606
134 5AJ0 47 Au 60S ribosomal protein L10a 9606
135 4D67 43 u 60S RIBOSOMAL PROTEIN L10A 9986
136 4D5Y 43 u 60S RIBOSOMAL PROTEIN UL1 9986
137 3J8G 23 5 50S ribosomal protein L1 562
138 4V3P 36 LA Ribosomal protein 4565
139 3J7R 46 z Ribosomal protein uL1 9823
140 4UJC 49 Bu 60S RIBOSOMAL PROTEIN L10A 9986
141 4UJD 46 Au 60S RIBOSOMAL PROTEIN L10A 9986
142 3J77 1 L1 60S ribosomal protein L1 4932
143 3J78 1 L1 60S ribosomal protein L1 4932
144 3J6X 4 L1 60S ribosomal protein L1 4932
145 3J6Y 4 L1 60S ribosomal protein L1 4932
146 4UJE 80 Cu 60S RIBOSOMAL PROTEIN L10A 9986
147 4V91 45 t UL1 RIBOSOMAL PROTEIN UL1 28985
148 4CSU 6 5 50S RIBOSOMAL PROTEIN L1 562
149 4V7F 4 A 60S ribosomal protein L1 4932
150 4V7E 40 Cz 60S ribosomal protein L1 4565
151 4V7D 3 AC 50S ribosomal protein L1 562
152 4V7C 27 BC 50S ribosomal protein L1 562
153 3J5S 5 F 50S ribosomal protein L1 562
154 4V6Y 56 B5 50S ribosomal protein L1 562
155 4V6Z 56 B5 50S ribosomal protein L1 562
156 4V70 56 B5 50S ribosomal protein L1 562
157 4V71 56 B5 50S ribosomal protein L1 562
158 4V72 56 B5 50S ribosomal protein L1 562
159 4V73 56 B5 50S ribosomal protein L1 562
160 4V74 56 B5 50S ribosomal protein L1 562
161 4V75 56 B5 50S ribosomal protein L1 562
162 4V76 56 B5 50S ribosomal protein L1 562
163 4V77 56 B5 50S ribosomal protein L1 562
164 4V78 56 B5 50S ribosomal protein L1 562
165 4V79 56 B5 50S ribosomal protein L1 562
166 4V7A 55 B5 50S ribosomal protein L1 562
167 4V8Y 79 By, CL 50S RIBOSOMAL PROTEIN L1 4932
168 3J46 7 5 50S ribosomal protein L1 562
169 4V4N 41 AA 50S ribosomal protein L1P SEE REMARK 999 2190
170 3J3V 3 5 50S ribosomal protein L1 1423
171 3J3W 18 5 50S ribosomal protein L1 1423
172 4V6W 38 Cz 60S ribosomal protein L10a-2 7227
173 4V6X 38 Cz 60S ribosomal protein L10a 9606
174 4V6V 25 BC 50S ribosomal protein L1 562
175 4V8M 43 BJ RIBOSOMAL PROTEIN 185431
176 4V6U 46 BA 50S ribosomal protein L1P 2261
177 4V6S 3 AC 50S ribosomal protein L1 2285
178 4V6P 27 BC 50S ribosomal protein L1 2285
179 4V6Q 27 BC 50S ribosomal protein L1 2285
180 4V6R 27 BC 50S ribosomal protein L1 2285
181 4V6N 3 AC 50S ribosomal protein L1 2285
182 4V6O 27 BC 50S ribosomal protein L1 2285
183 3J0Q 15 B Ribosomal protein L10a 9986
184 3J0P 14 B Ribosomal protein L10a 9986
185 3J0O 23 B Ribosomal protein L10a 9986
186 3J0L 24 B Ribosomal protein L10a 9986
187 4V6M 30 B5 50S ribosomal protein L1 562
188 4V6K 3 AC 50S ribosomal protein L1 562
189 4V6L 27 BC 50S ribosomal protein L1 562
190 4V5N 37 BC 50S RIBOSOMAL PROTEIN L1 274
191 4V6I 30 BA 60S ribosomal protein rpL1 (L1p) 4932
192 4V5M 37 BC 50S RIBOSOMAL PROTEIN L1 274
193 4V5H 30 B5 50S RIBOSOMAL PROTEIN L1 562
194 4V7I 6 A5 50S ribosomal protein L1 562
195 4V7H 25 BA 60S ribosomal protein L1 5541
196 4V68 40 BC 50S ribosomal protein L1 274
197 4V69 27 B5 50S ribosomal protein L1 562
198 4V65 49 BZ 50S ribosomal protein L1P 2285
199 4V66 49 BZ 50S ribosomal protein L1P 2285
200 4V5Z 85 B5 60S Ribosomal protein L10a 9612
201 2RDO 32 9 50S ribosomal protein L1 562
202 2OM7 12 K 50S ribosomal protein L1 274
203 2NOQ 7 G 60S ribosomal protein L1 4932
204 4V4V 24 B2 50S ribosomal protein L1 562
205 4V4W 24 B2 50S ribosomal protein L1 562
206 4V4B 20 BA 60S ribosomal protein L1 4932
207 1ML5 27 c 50S RIBOSOMAL PROTEIN L1 562
208 4V42 27 BC 50S RIBOSOMAL PROTEIN L1 274
209 487D 1 H PROTEIN (50S L1 RIBOSOMAL PROTEIN) 274
210 1EG0 13 N PROTEIN (RIBOSOMAL PROTEIN L1) MODELED BY ANALOGOUS PROTEIN OF T. THERMOPHILUS TAKEN FROM PDB ENTRY 1AD2 562