Sequence Similarity Clusters for the Entities in PDB 1DWD

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 302 331 44
95 % 303 332 60
90 % 303 332 65
70 % 304 334 77
50 % 304 334 101
40 % 304 334 125
30 % 304 334 137
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 262 286 55
95 % 337 370 36
90 % 342 377 38
70 % 359 401 44
50 % 359 401 78
40 % 1478 1635 4
30 % 1597 1777 6
Entity #3 | Chains: I
HIRUDIN IIIA protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.