Sequence Similarity Clusters for the Entities in PDB 1DWC

Entity #1 | Chains: L
ALPHA-THROMBIN (SMALL SUBUNIT) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 293 328 43
95 % 294 329 58
90 % 294 329 63
70 % 295 331 72
50 % 295 331 97
40 % 295 331 120
30 % 295 331 134
Entity #2 | Chains: H
ALPHA-THROMBIN (LARGE SUBUNIT) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 253 283 52
95 % 328 367 34
90 % 333 374 36
70 % 350 398 41
50 % 350 398 74
40 % 1441 1611 4
30 % 1560 1753 6
Entity #3 | Chains: I
HIRUDIN IIIA protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.