Sequence Similarity Clusters for the Entities in PDB 1DVY

Entity #1 | Chains: A,B
TRANSTHYRETIN protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 13 1408
95 % 235 291 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 235 291 11
70 % 236 297 14
50 % 240 301 20
40 % 240 301 29
30 % 245 313 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.