Sequence Similarity Clusters for the Entities in PDB 1DVQ

Entity #1 | Chains: A,B
TRANSTHYRETIN protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 1471
95 % 257 292 11 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 257 292 12
70 % 258 298 16
50 % 262 302 22
40 % 262 302 34
30 % 268 314 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures