Sequence Similarity Clusters for the Entities in PDB 1DVM

Entity #1 | Chains: A,B,C,D
PLASMINOGEN ACTIVATOR INHIBITOR-1 protein, length: 379 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 7040
95 % 13 21 1204 Flexibility: Low
Max RMSD: 10.1, Avg RMSD: 2.9
PDBFlex
90 % 13 21 1232
70 % 14 22 1228
50 % 14 22 1288
40 % 17 26 1126
30 % 91 178 183

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.