Sequence Similarity Clusters for the Entities in PDB 1DVJ

Entity #1 | Chains: A,B,C,D
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 15 2211
95 % 67 114 134 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 67 114 138
70 % 67 114 161
50 % 67 114 198
40 % 68 122 204
30 % 84 203 128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures