Sequence Similarity Clusters for the Entities in PDB 1DVI

Entity #1 | Chains: A,B
CALPAIN protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43012
95 % 1 6 9580 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.7
PDBFlex
90 % 12 21 1679
70 % 12 21 1697
50 % 12 22 1554
40 % 12 22 1573
30 % 24 46 591

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures