Sequence Similarity Clusters for the Entities in PDB 1DV6

Entity #1 | Chains: L,R
PHOTOSYNTHETIC REACTION CENTER protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 51 68 404
95 % 65 97 333
90 % 65 97 360
70 % 65 97 398
50 % 81 126 327
40 % 81 126 350
30 % 81 126 358
Entity #2 | Chains: M,S
PHOTOSYNTHETIC REACTION CENTER protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 62 450
95 % 65 97 332
90 % 65 97 359
70 % 65 97 396
50 % 81 126 326
40 % 81 126 348
30 % 81 126 356
Entity #3 | Chains: H,T
PHOTOSYNTHETIC REACTION CENTER protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 65 96 240
95 % 65 97 334
90 % 65 97 361
70 % 65 97 399
50 % 65 97 465
40 % 81 126 351
30 % 81 126 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.