Sequence Similarity Clusters for the Entities in PDB 1DV4

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
RIBOSOMAL PROTEIN S5 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 19875
95 % 3 4 17220
90 % 3 4 16780
70 % 4 5 11913
50 % 353 354 30
40 % 353 354 40
30 % 355 356 57
Entity #3 | Chains: G
RIBOSOMAL PROTEIN S7 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 258 259 25
95 % 259 260 36
90 % 259 260 41
70 % 259 260 50
50 % 308 309 53
40 % 309 310 66
30 % 309 310 86

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.