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PARTIAL STRUCTURE OF 16S RNA OF THE SMALL RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Sequence Clustering and Redundancy Reduction Results
1DV4
Sequence Clusters for the Sequence Entities in PDB 1DV4
Entity #1: Chains: A - 16S RIBOSOMAL RNA rna, length: 362 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: E - RIBOSOMAL PROTEIN S5 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 18225
95% 3 4 15889
90% 3 4 15486
70% 4 5 10975
50% 303 304 37
40% 303 304 47
30% 305 306 63
Entity #3: Chains: G - RIBOSOMAL PROTEIN S7 protein, length: 135 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 222 223 27
95% 223 224 40
90% 223 224 44
70% 223 224 55
50% 266 267 51
40% 267 268 64
30% 267 268 83
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.