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PARTIAL STRUCTURE OF 16S RNA OF THE SMALL RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Sequence Clustering and Redundancy Reduction Results
1DV4
Sequence Clusters for the Sequence Entities in PDB 1DV4
Entity #1: Chains: A - 16S RIBOSOMAL RNA rna, length: 362 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: E - RIBOSOMAL PROTEIN S5 protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 17510
95% 3 4 15269
90% 3 4 14897
70% 3 4 13844
50% 277 278 37
40% 277 278 48
30% 279 280 71
Entity #3: Chains: G - RIBOSOMAL PROTEIN S7 protein, length: 135 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 201 202 18
95% 202 203 32
90% 202 203 34
70% 202 203 45
50% 244 245 53
40% 245 246 70
30% 245 246 94
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.