Sequence Similarity Clusters for the Entities in PDB 1DV4

Entity #1 | Chains: A
16S RIBOSOMAL RNA rna, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
RIBOSOMAL PROTEIN S5 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 18998
95 % 3 4 16517
90 % 3 4 16088
70 % 4 5 11390
50 % 327 328 33
40 % 327 328 43
30 % 329 330 59
Entity #3 | Chains: G
RIBOSOMAL PROTEIN S7 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 242 243 14
95 % 243 244 25
90 % 243 244 29
70 % 243 244 40
50 % 288 289 50
40 % 289 290 62
30 % 289 290 83

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.