Sequence Similarity Clusters for the Entities in PDB 1DUY

Entity #1 | Chains: A,D
HLA-A2*0201 protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 97 197 52
95 % 131 246 58
90 % 143 286 35
70 % 331 662 7
50 % 332 667 7
40 % 352 715 11
30 % 376 832 15
Entity #2 | Chains: B,E
BETA-2 MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 310 577 2
95 % 337 620 3
90 % 340 629 4
70 % 402 857 5
50 % 408 877 5
40 % 408 877 9
30 % 408 877 14
Entity #3 | Chains: C,F
HTLV-1 OCTAMERIC TAX PEPTIDE protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.