Sequence Similarity Clusters for the Entities in PDB 1DUO

Entity #1 | Chains: A
SPERM WHALE METAQUOMYOGLOBIN VARIANT H93G protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16317
95 % 250 281 120 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 250 281 124
70 % 336 387 74
50 % 337 389 100
40 % 347 399 122
30 % 679 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures