Sequence Similarity Clusters for the Entities in PDB 1DUM

Entity #1 | Chains: A,B
MAGAININ 2 protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50522
95 % 1 1 37782
90 % 2 3 20980
70 % 7 8 3924
50 % 7 8 3808
40 % 7 8 3663
30 % 7 8 3429

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures