Sequence Similarity Clusters for the Entities in PDB 1DUL

Entity #1 | Chains: B
4.5 S RNA DOMAIN IV rna, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG) protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49955
95 % 1 2 37262
90 % 1 2 35552
70 % 1 2 31579
50 % 1 2 26973
40 % 1 2 23801
30 % 1 2 20178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures