Sequence Similarity Clusters for the Entities in PDB 1DUK

Entity #1 | Chains: A
WILD-TYPE RECOMBINANT SPERM WHALE METAQUOMYOGLOBIN protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 80 94 322
95 % 250 269 121 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 250 269 125
70 % 346 374 73
50 % 348 376 100
40 % 358 386 121
30 % 786 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures