Sequence Similarity Clusters for the Entities in PDB 1DUD

Entity #1 | Chains: A
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 9844
95 % 10 10 7471 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 10 10 7434
70 % 11 11 6490
50 % 12 12 5661
40 % 39 46 531
30 % 151 231 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures