Sequence Similarity Clusters for the Entities in PDB 1DTW

Entity #1 | Chains: A
BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE ALPHA SUBUNIT protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 6919
95 % 24 24 2285 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 24 24 2350
70 % 24 24 2343
50 % 24 24 2322
40 % 24 24 2311
30 % 33 33 1054
Entity #2 | Chains: B
BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE BETA SUBUNIT protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 23 1858
95 % 24 24 2288 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 24 24 2352
70 % 24 24 2346
50 % 24 24 2326
40 % 34 35 995
30 % 39 42 593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.