Sequence Similarity Clusters for the Entities in PDB 1DTW

Entity #1 | Chains: A
BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE ALPHA SUBUNIT protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 7029
95 % 24 24 2322 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 24 24 2389
70 % 24 24 2386
50 % 24 24 2364
40 % 24 24 2354
30 % 33 33 1080
Entity #2 | Chains: B
BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE BETA SUBUNIT protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 23 1900
95 % 24 24 2325 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 24 24 2391
70 % 24 24 2388
50 % 24 24 2367
40 % 34 35 1013
30 % 39 42 603

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures