Sequence Similarity Clusters for the Entities in PDB 1DTT

Entity #1 | Chains: A
HIV-1 RT A-CHAIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 43 61 537
95 % 119 255 91 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 119 255 95
70 % 119 255 112
50 % 120 256 151
40 % 120 257 164
30 % 120 257 176
Entity #2 | Chains: B
HIV-1 RT B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 57 662
95 % 115 249 115 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 115 249 119
70 % 115 249 134
50 % 116 251 159
40 % 116 251 174
30 % 116 251 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures