Sequence Similarity Clusters for the Entities in PDB 1DTQ

Entity #1 | Chains: A
HIV-1 RT A-CHAIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 61 549
95 % 121 257 110
90 % 121 257 114
70 % 121 257 128
50 % 122 258 156
40 % 122 259 167
30 % 122 259 177
Entity #2 | Chains: B
HIV-1 RT B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 57 673
95 % 117 251 118 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 117 251 122
70 % 117 251 137
50 % 118 253 164
40 % 118 253 175
30 % 118 253 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures