Sequence Similarity Clusters for the Entities in PDB 1DTQ

Entity #1 | Chains: A
HIV-1 RT A-CHAIN protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 61 526
95 % 115 248 91
90 % 115 248 96
70 % 115 248 115
50 % 116 249 150
40 % 116 249 165
30 % 116 249 180
Entity #2 | Chains: B
HIV-1 RT B-CHAIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 57 644
95 % 111 242 116 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 111 242 120
70 % 111 242 136
50 % 112 243 157
40 % 112 243 175
30 % 112 243 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.