Sequence Similarity Clusters for the Entities in PDB 1DTD

Entity #1 | Chains: A
CARBOXYPEPTIDASE A2 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56103
95 % 1 1 40191
90 % 1 1 38400
70 % 1 1 34104
50 % 15 44 858
40 % 27 83 366
30 % 38 96 332
Entity #2 | Chains: B
METALLOCARBOXYPEPTIDASE INHIBITOR protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 24410
95 % 1 5 9980 Flexibility: Medium
Max RMSD: 8.7, Avg RMSD: 3.8
PDBFlex
90 % 1 5 9858
70 % 1 5 9364
50 % 1 5 8473
40 % 1 5 7766
30 % 1 5 6853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.