Sequence Similarity Clusters for the Entities in PDB 1DSZ

Entity #1 | Chains: C
DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*AP*G)-3') dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*G)-3') dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
RETINOIC ACID RECEPTOR ALPHA protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72260
95 % 1 2 36389
90 % 1 2 34733
70 % 1 2 30857
50 % 2 34 852
40 % 2 37 809
30 % 2 37 800
Entity #4 | Chains: B
RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 3165
95 % 1 9 3434
90 % 1 9 3489
70 % 1 12 2946
50 % 3 34 852
40 % 3 37 809
30 % 3 37 800

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures