Sequence Similarity Clusters for the Entities in PDB 1DSZ

Entity #1 | Chains: C
DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*AP*G)-3') dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*G)-3') dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
RETINOIC ACID RECEPTOR ALPHA protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71139
95 % 1 2 35826
90 % 1 2 34218
70 % 1 2 30419
50 % 2 34 838
40 % 2 37 793
30 % 2 37 783
Entity #4 | Chains: B
RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 3090
95 % 1 9 3357
90 % 1 9 3410
70 % 1 12 2885
50 % 3 34 838
40 % 3 37 793
30 % 3 37 783

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.