Sequence Similarity Clusters for the Entities in PDB 1DSX

Entity #1 | Chains: A,B,C,D,E,F,G,H
PROTEIN (KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL) protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9893
95 % 1 2 4286 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 4318
70 % 3 10 2269
50 % 3 10 2246
40 % 3 11 2158
30 % 3 11 2063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures