Sequence Similarity Clusters for the Entities in PDB 1DSX

Entity #1 | Chains: A,B,C,D,E,F,G,H
PROTEIN (KV1.2 VOLTAGE-GATED POTASSIUM CHANNEL) protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 9750
95 % 1 2 4211 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 4241
70 % 3 10 2231
50 % 3 10 2209
40 % 3 11 2124
30 % 3 11 2037

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.