Sequence Similarity Clusters for the Entities in PDB 1DSS

Entity #1 | Chains: G,R
D-GLYCERALDEHYDE-3-PHOSPHATE-DEHYDROGENASE protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13189
95 % 1 7 3281 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 1 7 3338
70 % 7 29 550
50 % 16 146 75
40 % 16 146 97
30 % 16 146 110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures