Sequence Similarity Clusters for the Entities in PDB 1DSS

Entity #1 | Chains: G,R
D-GLYCERALDEHYDE-3-PHOSPHATE-DEHYDROGENASE protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12512
95 % 1 7 3200 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 1 7 3245
70 % 7 29 545
50 % 16 145 72
40 % 16 145 95
30 % 16 145 105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures