Sequence Similarity Clusters for the Entities in PDB 1DSE

Entity #1 | Chains: A
CYTOCHROME C PEROXIDASE protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 11250
95 % 147 224 136 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 147 224 142
70 % 147 224 164
50 % 147 224 198
40 % 147 224 213
30 % 212 303 165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures