Sequence Similarity Clusters for the Entities in PDB 1DS8

Entity #1 | Chains: L,R
REACTION CENTER PROTEIN L CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 41 68 331
95 % 50 96 319
90 % 50 96 343
70 % 50 96 379
50 % 66 120 327
40 % 66 120 353
30 % 66 120 358
Entity #2 | Chains: M,S
REACTION CENTER PROTEIN M CHAIN protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 61 407
95 % 50 96 318
90 % 50 96 341
70 % 50 96 378
50 % 66 120 326
40 % 66 120 351
30 % 66 120 357
Entity #3 | Chains: H,T
REACTION CENTER PROTEIN H CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 95 229
95 % 50 96 321
90 % 50 96 344
70 % 50 96 380
50 % 50 96 438
40 % 66 120 354
30 % 66 120 359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.