Sequence Similarity Clusters for the Entities in PDB 1DS8

Entity #1 | Chains: L,R
REACTION CENTER PROTEIN L CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 41 68 433
95 % 50 97 347
90 % 50 97 372
70 % 50 97 408
50 % 68 129 348
40 % 68 129 374
30 % 68 129 375
Entity #2 | Chains: M,S
REACTION CENTER PROTEIN M CHAIN protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 62 485
95 % 50 97 346
90 % 50 97 371
70 % 50 97 406
50 % 68 129 347
40 % 68 129 373
30 % 68 129 374
Entity #3 | Chains: H,T
REACTION CENTER PROTEIN H CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 50 96 251
95 % 50 97 348
90 % 50 97 373
70 % 50 97 409
50 % 50 97 487
40 % 68 129 375
30 % 68 129 376

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.