Sequence Similarity Clusters for the Entities in PDB 1DS5

Entity #1 | Chains: A,B,C,D
CASEIN KINASE, ALPHA CHAIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 32 1040
95 % 40 40 1132 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 40 40 1159
70 % 134 138 180
50 % 140 144 213
40 % 140 144 234
30 % 3601 3825 2
Entity #2 | Chains: E,F,G,H
CASEIN KINASE, BETA CHAIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24608
95 % 1 1 21017
90 % 1 1 20427
70 % 1 1 18758
50 % 1 1 16312
40 % 1 1 14568
30 % 1 1 12491

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.