Sequence Similarity Clusters for the Entities in PDB 1DS5

Entity #1 | Chains: A,B,C,D
CASEIN KINASE, ALPHA CHAIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 32 1279
95 % 41 41 1192 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 41 41 1213
70 % 171 175 157
50 % 177 181 186
40 % 177 181 200
30 % 4030 4287 2
Entity #2 | Chains: E,F,G,H
CASEIN KINASE, BETA CHAIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18173
95 % 1 1 16689
90 % 1 1 16315
70 % 1 1 15194
50 % 1 1 13340
40 % 1 1 11956
30 % 1 1 10115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures