Sequence Similarity Clusters for the Entities in PDB 1DS5

Entity #1 | Chains: A,B,C,D
CASEIN KINASE, ALPHA CHAIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 32 1072
95 % 40 40 1154 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 40 40 1181
70 % 138 142 179
50 % 144 148 212
40 % 144 148 231
30 % 3698 3924 2
Entity #2 | Chains: E,F,G,H
CASEIN KINASE, BETA CHAIN protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 25084
95 % 1 1 21382
90 % 1 1 20778
70 % 1 1 19079
50 % 1 1 16581
40 % 1 1 14799
30 % 1 1 12692

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures