Sequence Similarity Clusters for the Entities in PDB 1DS2

Entity #1 | Chains: E
PROTEINASE B (SGPB) protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 7279
95 % 12 28 2093 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 12 28 2143
70 % 12 28 2157
50 % 37 89 532
40 % 37 89 576
30 % 37 89 577
Entity #2 | Chains: I
OVOMUCOID protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 18 3323
95 % 15 42 1297 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 15 42 1318
70 % 16 44 1202
50 % 16 47 1182
40 % 16 48 1166
30 % 17 59 953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures