Sequence Similarity Clusters for the Entities in PDB 1DS2

Entity #1 | Chains: E
PROTEINASE B (SGPB) protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 6530
95 % 12 28 1979 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 12 28 2028
70 % 12 28 2042
50 % 35 85 568
40 % 35 85 608
30 % 35 85 596
Entity #2 | Chains: I
OVOMUCOID protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 48886
95 % 15 42 1210 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 16 44 1115
70 % 16 44 1155
50 % 16 47 1123
40 % 16 48 1122
30 % 16 49 1078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.