Sequence Similarity Clusters for the Entities in PDB 1DS2

Entity #1 | Chains: E
PROTEINASE B (SGPB) protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 6794
95 % 12 28 2075 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 12 28 2127
70 % 12 28 2135
50 % 37 89 525
40 % 37 89 565
30 % 37 89 559
Entity #2 | Chains: I
OVOMUCOID protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 50563
95 % 15 42 1264 Flexibility: No
Max RMSD: 2.5, Avg RMSD: 0.4
PDBFlex
90 % 16 44 1166
70 % 16 44 1192
50 % 16 47 1163
40 % 16 48 1161
30 % 16 49 1113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures