Sequence Similarity Clusters for the Entities in PDB 1DRZ

Entity #1 | Chains: B
RNA (HEPATITIS DELTA VIRUS GENOMIC RIBOZYME) rna, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
PROTEIN (U1 SMALL RIBONUCLEOPROTEIN A) protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 59 354
95 % 21 63 371 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 0.8
PDBFlex
90 % 21 63 394
70 % 21 65 412
50 % 21 65 484
40 % 21 65 535
30 % 21 65 536

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures