Sequence Similarity Clusters for the Entities in PDB 1DQX

Entity #1 | Chains: A,B,C,D
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 8876
95 % 7 7 2543 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 7 7 2602
70 % 7 7 2590
50 % 44 45 594
40 % 44 45 631
30 % 44 45 615

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures