Sequence Similarity Clusters for the Entities in PDB 1DQW

Entity #1 | Chains: A,B,C,D
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9554
95 % 5 7 2621 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 5 7 2694
70 % 5 7 2668
50 % 41 45 611
40 % 41 45 650
30 % 188 203 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures