Sequence Similarity Clusters for the Entities in PDB 1DQV

Entity #1 | Chains: A
SYNAPTOTAGMIN III protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19043
95 % 2 2 16892 Flexibility: High
Max RMSD: 15.3, Avg RMSD: 10.2
PDBFlex
90 % 2 2 16546
70 % 2 2 15389
50 % 5 9 3004
40 % 5 9 2942
30 % 5 9 2752

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.