Sequence Similarity Clusters for the Entities in PDB 1DQV

Entity #1 | Chains: A
SYNAPTOTAGMIN III protein, length: 296 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19584
95 % 2 2 17364 Flexibility: Medium
Max RMSD: 15.3, Avg RMSD: 7.7
PDBFlex
90 % 2 2 17022
70 % 2 2 15834
50 % 5 9 3078
40 % 6 10 2750
30 % 6 10 2576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures