Sequence Similarity Clusters for the Entities in PDB 1DQT

Entity #1 | Chains: A,B,C,D
CYTOTOXIC T LYMPHOCYTE ASSOCIATED ANTIGEN 4 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7558
95 % 2 3 8117 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 2 3 8065
70 % 2 3 7801
50 % 4 13 2734
40 % 4 13 2690
30 % 4 14 2440

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures