Sequence Similarity Clusters for the Entities in PDB 1DQS

Entity #1 | Chains: A,B
PROTEIN (3-DEHYDROQUINATE SYNTHASE) protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 2517
95 % 1 10 2809 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 1 10 2867
70 % 1 10 2834
50 % 1 11 2541
40 % 1 11 2492
30 % 2 28 1061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures