Sequence Similarity Clusters for the Entities in PDB 1DQJ

Entity #1 | Chains: A
ANTI-LYSOZYME ANTIBODY HYHEL-63 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 3778
95 % 11 22 1941
90 % 13 26 1472
70 % 439 1639 3
50 % 1093 3985 1
40 % 1094 3986 1
30 % 1206 4715 1
Entity #2 | Chains: B
ANTI-LYSOZYME ANTIBODY HYHEL-63 (HEAVY CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 11465
95 % 4 11 5125
90 % 5 12 4510
70 % 529 1932 1
50 % 1094 3985 1
40 % 1095 3986 1
30 % 1207 4715 1
Entity #3 | Chains: C
LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 462 583 3
95 % 513 636 4
90 % 523 653 5
70 % 723 868 6
50 % 727 877 6
40 % 747 911 10
30 % 747 911 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.