Sequence Similarity Clusters for the Entities in PDB 1DQJ

Entity #1 | Chains: A
ANTI-LYSOZYME ANTIBODY HYHEL-63 (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 12 4026
95 % 13 25 1770
90 % 15 32 1280
70 % 473 1765 2
50 % 1198 4337 1
40 % 1198 4337 1
30 % 1322 5109 1
Entity #2 | Chains: B
ANTI-LYSOZYME ANTIBODY HYHEL-63 (HEAVY CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 12138
95 % 4 11 5420
90 % 5 12 4800
70 % 576 2096 1
50 % 1199 4337 1
40 % 1199 4337 1
30 % 1323 5109 1
Entity #3 | Chains: C
LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 503 626 3
95 % 554 679 4
90 % 564 696 5
70 % 764 912 6
50 % 768 920 6
40 % 788 954 10
30 % 788 954 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.