Sequence Similarity Clusters for the Entities in PDB 1DQG

Entity #1 | Chains: A
MANNOSE RECEPTOR protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 22776
95 % 1 4 16924 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 4 19785
70 % 1 4 18157
50 % 1 4 15754
40 % 1 4 13990
30 % 1 4 11753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1DQG 1 A MANNOSE RECEPTOR CYSTEINE RICH DOMAIN 10090
2 1FWU 1 A CYSTEINE-RICH DOMAIN OF MANNOSE RECEPTOR COMPLEXED WITH 3-SO4-LEWIS(X) N-TERMINAL DOMAIN OF MANNOSE RECEPTOR 10090
3 1FWV 1 A CYSTEINE-RICH DOMAIN OF MANNOSE RECEPTOR COMPLEXED WITH 3-SO4-LEWIS(A) N-TERMINAL DOMAIN OF MANNOSE RECEPTOR 10090
4 1DQO 1 A MANNOSE RECEPTOR CYSTEINE RICH DOMAIN 10090