Sequence Similarity Clusters for the Entities in PDB 1DQD

Entity #1 | Chains: L
FAB HGR-2 F6 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57402
95 % 2 10 3398
90 % 27 145 139
70 % 573 1803 2
50 % 1446 4435 1
40 % 1446 4435 1
30 % 1619 5225 1
Entity #2 | Chains: H
FAB HGR-2 F6 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57327
95 % 1 1 40250
90 % 5 12 3442
70 % 698 2145 1
50 % 1447 4435 1
40 % 1447 4435 1
30 % 1620 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.