Sequence Similarity Clusters for the Entities in PDB 1DQD

Entity #1 | Chains: L
FAB HGR-2 F6 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59118
95 % 2 10 3497
90 % 27 145 141
70 % 726 2280 1
50 % 1489 4619 1
40 % 1489 4619 1
30 % 1670 5440 1
Entity #2 | Chains: H
FAB HGR-2 F6 protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59040
95 % 1 1 41502
90 % 5 12 3540
70 % 719 2238 2
50 % 1490 4619 1
40 % 1490 4619 1
30 % 1671 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.