Sequence Similarity Clusters for the Entities in PDB 1DQ8

Entity #1 | Chains: A,B,C,D
PROTEIN (HMG-COA REDUCTASE) protein, length: 467 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 22 428
95 % 6 22 542 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.6
PDBFlex
90 % 6 22 571
70 % 6 22 600
50 % 6 22 644
40 % 6 22 685
30 % 6 22 685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures