Sequence Similarity Clusters for the Entities in PDB 1DPZ

Entity #1 | Chains: A,B
3-ISOPROPYLMALATE DEHYDROGENASE protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8429
95 % 18 21 1408 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.5
PDBFlex
90 % 20 23 1365
70 % 20 23 1381
50 % 44 52 484
40 % 62 82 259
30 % 104 131 205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures