Sequence Similarity Clusters for the Entities in PDB 1DPP

Entity #1 | Chains: A,C,E,G
DIPEPTIDE BINDING PROTEIN protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16925
95 % 2 2 13600 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.6
PDBFlex
90 % 2 2 13389
70 % 3 3 9429
50 % 5 5 6634
40 % 10 10 2308
30 % 10 10 2205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.