Sequence Similarity Clusters for the Entities in PDB 1DPJ

Entity #1 | Chains: A
PROTEINASE A protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14474
95 % 1 11 5408 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 11 5424
70 % 1 11 5356
50 % 1 11 5072
40 % 7 111 250
30 % 536 712 28
Entity #2 | Chains: B
PROTEINASE INHIBITOR IA3 PEPTIDE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72551
95 % 1 2 36088 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 34492
70 % 1 2 30774
50 % 1 2 26373
40 % 1 2 23318
30 % 1 2 19832

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.