Sequence Similarity Clusters for the Entities in PDB 1DPJ

Entity #1 | Chains: A
PROTEINASE A protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14705
95 % 1 11 5508 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 11 5526
70 % 1 11 5447
50 % 1 11 5156
40 % 7 116 239
30 % 536 717 28
Entity #2 | Chains: B
PROTEINASE INHIBITOR IA3 PEPTIDE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73719
95 % 1 2 36594
90 % 1 2 34956
70 % 1 2 31127
50 % 1 2 26637
40 % 1 2 23553
30 % 1 2 20042

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.