Sequence Similarity Clusters for the Entities in PDB 1DPJ

Entity #1 | Chains: A
PROTEINASE A protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14256
95 % 1 11 5302 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 11 5322
70 % 1 11 5255
50 % 1 11 4986
40 % 7 110 251
30 % 532 707 28
Entity #2 | Chains: B
PROTEINASE INHIBITOR IA3 PEPTIDE protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71698
95 % 1 2 35585 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 34026
70 % 1 2 30358
50 % 1 2 26027
40 % 1 2 23018
30 % 1 2 19571

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.