Sequence Similarity Clusters for the Entities in PDB 1DPE

Entity #1 | Chains: A
DIPEPTIDE-BINDING PROTEIN protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52199
95 % 1 2 13907 Flexibility: Medium
Max RMSD: 6.5, Avg RMSD: 4.4
PDBFlex
90 % 1 2 13691
70 % 2 3 9603
50 % 4 5 6776
40 % 6 10 2365
30 % 6 10 2255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures