Sequence Similarity Clusters for the Entities in PDB 1DP7

Entity #1 | Chains: D
DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
MHC CLASS II TRANSCRIPTION FACTOR HRFX1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66173
95 % 1 1 45834
90 % 1 1 43620
70 % 1 1 38512
50 % 1 1 32999
40 % 1 1 29096
30 % 1 1 24535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.