Sequence Similarity Clusters for the Entities in PDB 1DP7

Entity #1 | Chains: D
DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
MHC CLASS II TRANSCRIPTION FACTOR HRFX1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73054
95 % 1 1 50567
90 % 1 1 47934
70 % 1 1 42004
50 % 1 1 35806
40 % 1 1 31546
30 % 1 1 26607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures