Sequence Similarity Clusters for the Entities in PDB 1DP7

Entity #1 | Chains: D
DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
MHC CLASS II TRANSCRIPTION FACTOR HRFX1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67809
95 % 1 1 46958
90 % 1 1 44657
70 % 1 1 39370
50 % 1 1 33723
40 % 1 1 29746
30 % 1 1 25092

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.