Sequence Similarity Clusters for the Entities in PDB 1DP7

Entity #1 | Chains: D
DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3') dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
MHC CLASS II TRANSCRIPTION FACTOR HRFX1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59704
95 % 1 1 48767
90 % 1 1 46299
70 % 1 1 42071
50 % 1 1 35689
40 % 1 1 31248
30 % 1 1 26120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures