Sequence Similarity Clusters for the Entities in PDB 1DP5

Entity #1 | Chains: A
PROTEINASE A protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 15065
95 % 3 11 5640 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 11 5662
70 % 3 11 5572
50 % 3 11 5272
40 % 33 127 225
30 % 604 737 30
Entity #2 | Chains: B
PROTEINASE INHIBITOR IA3 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73144
95 % 1 1 50750
90 % 1 1 48131
70 % 1 1 42199
50 % 1 1 35976
40 % 1 1 31675
30 % 1 1 26735

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures