Sequence Similarity Clusters for the Entities in PDB 1DP5

Entity #1 | Chains: A
PROTEINASE A protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 6366
95 % 3 11 6061 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 11 6060
70 % 3 11 5914
50 % 3 11 5546
40 % 33 129 236
30 % 838 1116 11
Entity #2 | Chains: B
PROTEINASE INHIBITOR IA3 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64093
95 % 1 1 52038
90 % 1 1 49328
70 % 1 1 43144
50 % 1 1 36599
40 % 1 1 32022
30 % 1 1 26777

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures