Sequence Similarity Clusters for the Entities in PDB 1DP2

Entity #1 | Chains: A
RHODANESE protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 11498
95 % 2 7 11098 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 2 7 10936
70 % 2 7 10373
50 % 4 11 4445
40 % 4 12 3719
30 % 7 22 1976

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RHS 1 A SULFUR-SUBSTITUTED RHODANESE 9913 2.8.1.1 | Details
2 1DP2 1 A RHODANESE 9913 2.8.1.1 | Details
3 1ORB 1 A CARBOXYMETHYLATED RHODANESE 9913 2.8.1.1 | Details
4 1BOI 1 A RHODANESE DEL(1-7) 9913 2.8.1.1 | Details
5 1BOH 1 A RHODANESE SULFUR SUBSTITUTED AT RESIDUE CYS 247 9913 2.8.1.1 | Details
6 2ORA 1 A OXIDIZED RHODANESE 9913 2.8.1.1 | Details
7 1RHD 1 A RHODANESE 9913 2.8.1.1 | Details