Sequence Similarity Clusters for the Entities in PDB 1DOT

Entity #1 | Chains: A
DUCK OVOTRANSFERRIN protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30917
95 % 1 2 25468 Flexibility: Medium
Max RMSD: 8.2, Avg RMSD: 8.2
PDBFlex
90 % 1 2 24619
70 % 3 7 9453
50 % 17 48 885
40 % 17 48 910
30 % 17 48 894

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.