Sequence Similarity Clusters for the Entities in PDB 1DOQ

Entity #1 | Chains: A
RNA POLYMERASE ALPHA SUBUNIT protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72526
95 % 1 1 50356
90 % 1 1 47768
70 % 1 1 41892
50 % 1 1 35718
40 % 1 1 31446
30 % 4 4 12315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures