Sequence Similarity Clusters for the Entities in PDB 1DOM

Entity #1 | Chains: A,B
MCP-1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 7 6356
95 % 10 11 4047
90 % 10 11 4098
70 % 13 14 3294
50 % 18 19 2398
40 % 53 59 348
30 % 64 70 291

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures