Sequence Similarity Clusters for the Entities in PDB 1DOM

Entity #1 | Chains: A,B
MCP-1 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 8 5935
95 % 10 11 4321
90 % 10 11 4352
70 % 13 14 3282
50 % 18 19 2367
40 % 52 58 329
30 % 58 64 287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures