Sequence Similarity Clusters for the Entities in PDB 1DOK

Entity #1 | Chains: A,B
MONOCYTE CHEMOATTRACTANT PROTEIN 1 protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 5804
95 % 1 11 4225 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.0
PDBFlex
90 % 1 11 4255
70 % 1 14 3206
50 % 2 19 2309
40 % 9 58 309
30 % 10 63 287

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.