Sequence Similarity Clusters for the Entities in PDB 1DOG

Entity #1 | Chains: A
GLUCOAMYLASE-471 protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 11560
95 % 4 7 10274 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 4 7 10147
70 % 4 7 9632
50 % 4 7 8728
40 % 4 7 8000
30 % 7 10 5116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures