Sequence Similarity Clusters for the Entities in PDB 1DOG

Entity #1 | Chains: A
GLUCOAMYLASE-471 protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 13853
95 % 4 7 11262 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 4 7 11113
70 % 4 7 10496
50 % 4 7 9452
40 % 4 7 8564
30 % 7 10 5464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures