Sequence Similarity Clusters for the Entities in PDB 1DOG

Entity #1 | Chains: A
GLUCOAMYLASE-471 protein, length: 470 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 11140
95 % 4 7 9924 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 4 7 9810
70 % 4 7 9314
50 % 4 7 8439
40 % 4 7 7742
30 % 7 10 4939

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.