Sequence Similarity Clusters for the Entities in PDB 1DO2

Entity #1 | Chains: A,B,C,D
PROTEIN (HEAT SHOCK LOCUS U) protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 657
95 % 9 12 849 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.1
PDBFlex
90 % 9 12 881
70 % 13 16 582
50 % 13 16 628
40 % 13 16 657
30 % 13 16 653

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.